| Protein: | nas-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 579 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-11.
| Description | E-value | Query Range |
Subject Range |
|
|
624.0 | [0..1] | [578..1] |
|
Region A: Residues: [1-51] |
1 11 21 31 41 51
| | | | | |
1 MTPSLVFLIV VIVVVEGQGW RPWDRFNHPG NFGNWGGNNW GTRQRNQEPH D
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [52-275] |
1 11 21 31 41 51
| | | | | |
1 IPPPVPPPGF RGNNDRFGGN IIKVVEIIDL GKSKNRGDIL SDFKDVHKKH RHLGRKEWKG 60
61 KVKQFCHRFP GHPNCRRGKV PDQKELEEMI GQFSKGGIGR FLKRVPKIYI EDPLARVDPK 120
121 LKGFLENAGR GFGHVSSEHV NKLRDICKRR KCREQPESAK KTRELFTQKL ADFETKIAGK 180
181 DKTDSVQLRF DRTLQIKEAL LEKGNLTADI VPVDNGVYDL DTML
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [276-323] |
1 11 21 31 41 51
| | | | | |
1 TEEQANILLN ELNKAGVGDD EIPLPDADTD DEDDDDSTNS ASGAAPGS
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1su3A |
| Description: | X-ray structure of human proMMP-1: New insights into collagenase action |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [324-579] |
1 11 21 31 41 51
| | | | | |
1 SRLKKSALYF EGNLIKKWDP SSPIRYVLDS SLEDLDKNDV RAAIYEIEKN TCIRFKELSS 60
61 PPTGSHIVYY KVDSPTFCGL SYVGRADPAN PVYLSFGCDN NKGVAIHETM HALGVAHQHL 120
121 RNDRDQFITI NWSNIDPQQY DAFVVVDSKL YTSYGVKYAY DSIMHYNGYT AAQNIAIPTM 180
181 NPKTNSAVNL KVLGQRQKMG TTDIELLKKM YCQPGCDDKN VYCGAWALKD LCKNPGHDQY 240
241 MAANCKKSCG LCAIGK
|
| Detection Method: | |
| Confidence: | 56.154902 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.448845530777411 | bayes_pls_golite062009 |
