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View Structure Prediction Details

Protein: CE36600
Organism: Caenorhabditis elegans
Length: 440 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36600.

Description E-value Query
Range
Subject
Range
gi|2501463, gi|1... - sp|Q93008|FAFX_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X (Ubiquitin thiolesterase F...
175.0 [0..2] [353..1662]

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Predicted Domain #1
Region A:
Residues: [1-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLAMRYLK MSIRGIQMDA PEMMALIISW IENGIPIEAR LQLQDIFMGR PNHRFQLQSM  60
   61 VPNVIRLNVT HLNLERSIEE SGDWNMMSYD ILPKVVFIEV MRTTVIDEHA TKIHDKFEFP 120
  121 FHIHMDNFLE DASEDSQQTL HKYNLHAIIV HLGEDGKGHF MTYRSIRNNC DVEGLATQWV 180
  181 KLDDAISTII QRDQIASQSF GSGSNEDSSA VLLMFLQDYP ENIVNTKNIT STCWKALKIK 240
  241 VLKLLGSGDS GDVYAVTWMG TEYTLKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [268-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKSNNSKTKS EQLVEVQNMA KIQKVLPDAP NFPECLEAYF INDIPTEICQ KLQSSAKVRV  60
   61 DNYCRIVEYE SKTLTPVRRR PNPPFTQSGK KENGFWHEDL HKGNILLAVT DKDFIKYRVD 120
  121 KKLIKLRTNG LMETSLTSCS YRIMKELSKK LFEAKTIEEF WNYQDLLESV IVM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.88
Match: 2bujA
Description: Crystal structure of the human Serine-threonine Kinase 16 in complex with staurosporine
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle