| Protein: | acr-23 |
| Organism: | Caenorhabditis elegans |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-23.
| Description | E-value | Query Range |
Subject Range |
|
|
399.0 | [0..11] | [544..13] |
|
Region A: Residues: [1-374] |
1 11 21 31 41 51
| | | | | |
1 MHRIYTFLIF ISQLALGLSN NPDIPIQYEL ANNIMENYQK GLIPKVRKGS PINVTLSLQL 60
61 YQIIQVNEPQ QYLLLNAWAV ERWVDQMLGW DPSEFDNETE IMARHDDIWL PDTTLYNSLE 120
121 MDDSASKKLT HVKLTTLGKN QGAMVELLYP TIYKISCLLN LKYFPFDTQT CRMTFGSWSF 180
181 DNSLIDYFPR TFTNGPIGLA NFLENDAWSV LGTKVNREEK KYTCCPVNYT LLHYDVVIQR 240
241 KPLYYVLNLI APTAVITFIS IIGFFTSVNP FTNFCNVSSS VHDLRQEKIT LGITTLLSMS 300
301 IMIFMVSDKM PSTSTCVPLI ALFYTLMITI ISVGTLAASS VIFVQKLGSI GNPPASKTMK 360
361 WTHRIAPFVL IQMP
|
| Detection Method: |  |
| Confidence: | 71.69897 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [375-545] |
1 11 21 31 41 51
| | | | | |
1 LVMKQAYAKR AKEEKHRKRM SRKNSMWTKV YHLARDHSKL METVPDGAVK FNQISDFKNN 60
61 DIGNMESPRM AESQTSETFA APMDTSFTES LHIPELNRVA SSNSIQSVLK PTEIQLTPYC 120
121 TRNIVELEWD WVAAVLERVF LIFFTICFLF SAIGINLYGW YIWYTENHFL F
|
| Detection Method: | |
| Confidence: | 39.30103 |
| Match: | 1oedE |
| Description: | Acetylcholine receptor protein, gamma chain |
Matching Structure (courtesy of the PDB): |
|
