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View Structure Prediction Details

Protein: CE36936
Organism: Caenorhabditis elegans
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36936.

Description E-value Query
Range
Subject
Range
gi|109013482 - gi|109013482|ref|XP_001103910.1| PREDICTED: similar to choline/ethanolaminephosphotransferase isofor...
299.0 [0..2] [389..29]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYVKQEKHP LEYEYLQPEH LKGFDSYKYN CVDNSPLSVY VSHPFWNWLV VFYPRTWVPN  60
   61 VLTLVGWGFV MAGFFIEAYL DYSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRNSDGSTNP IPDWFWFAAA ACTFLGHTLD GTDGKQSRRI GASGPTGELF DHGLDSWSTV  60
   61 PFTITIFSIF GRGRFSISSV ELLCVLISTQ IVFFTTHWEK YNTGIMFLSW AYDVSQFGLV 120
  121 IVYLWTYIVG YQWFHFDVLG GIVNFAFTFE IGFYMCCLMS LIASAYNVHK AE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [257-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLKQPTILAG IRPAWPVVIL FGSSIYWAVH SPTNVIDADP RFFFFCMGTV FSNITCRLII  60
   61 AQMASTVCDI YNLTLGIYLS TIALSFYNPS NELPILRVST LVITALHLHY GICVVRQLCR 120
  121 HFKIYAFDVS YLQNRSK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle