| Protein: | acr-17 |
| Organism: | Caenorhabditis elegans |
| Length: | 515 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-17.
| Description | E-value | Query Range |
Subject Range |
|
|
388.0 | [0..21] | [514..1] |
|
Region A: Residues: [1-358] |
1 11 21 31 41 51
| | | | | |
1 MISFQLLLRI VVLHFLMGLA MAQQKQLIKY LFRDYHKELR PVKDESSGPT NVTVQLYFKQ 60
61 IQKVHENDQI ITLYCWIEEY WQDEFLTWNP SDFGNIKSLH VPSEMIWKPD LLVYNNANMN 120
121 IKENEMQTNV QIEHTGKISL FRAIITDITC DLQMEKFPYD QQICFIMLAS WSYDGSQIML 180
181 NTAEQPTEAP LDIKNTTNLA ILNHYIPNME WKLVDFRYRN NLKYYDCCPN PYPDISYFFA 240
241 IKRNPSYYLF TLIIPSAFIT IVTVIGFFTP HSSTGENTEK VSLGVTALLS LAIILMMVSD 300
301 KLPATSNSVP LLGQYYIGLI FIMFLATYCT TFTLGIQMQG NAGRPITRRL RSFLLSIR
|
| Detection Method: |  |
| Confidence: | 71.045757 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [359-515] |
1 11 21 31 41 51
| | | | | |
1 MNRNSFVQWF FGRELMNTQE SIKMRLKKYD KLSELKKKFA NGFVQFQQKL LKTDEPKHNK 60
61 TASLIEQESI DSSKLLDPAM YNVVVDVLSS VQSIRQDLTS QEHLKRIRKE WQMLARMLEK 120
121 IIMWIFIIST VAFASFMLYD TQDPPIITNE VMRSKST
|
| Detection Method: | |
| Confidence: | 37.69897 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
