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View Structure Prediction Details

Protein: CE37016
Organism: Caenorhabditis elegans
Length: 687 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37016.

Description E-value Query
Range
Subject
Range
CE37058 - status:Partially_confirmed UniProt:O62253 protein_id:CAB07212.3
327.0 [0..53] [687..354]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQDDLVVNR SQILQSSIDQ FDASQFVDVR LEIGEDQIKL ILETETTLDS GEVEVKNVWI  60
   61 AYRERDNGCV IENHDQQEFV D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLEFFDVSVL HLEHALSTMD VLKKFSLISV EKSQDKKIPT DQDLRTNSIF LEILSRMLAS  60
   61 RQKPLKAHIF EVHLWQEPFN NHAAIIMSYL KPQFLYSIIL STPMPGIYLN LSTFVALEQW 120
  121 LNGKEFRMIN FLTYLELDAF FHFTTIKLGM YHGTYEKLTE LKNHFLKHET PEYFELNYPE 180
  181 SFDNYRLVKS SDMSRKREHV KYKPNGD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.958607
Match: PF01827.18
Description: No description for PF01827.18 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [289-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHSMTWYFPV GDGEELDVLV KYRPEGKMGH HFLFKRVSAS VKLQMKNKKL DTGFKLLYLI  60
   61 PTNYQAMKRI IEKCSVVTIL SIRKVCKGLR SFVDTRCFEF PNKQLSIVID GGNCYLKIVT 120
  121 PDENMLLGYE KNAIGCSFWA DPAIYYNSDY IQTRTITG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [447-687]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTPLNVCMSD LGSILKHHKA PMDLIDFNLR AIDDVVILTE IIRETLMPEE KRLKVNRVFF  60
   61 FGIDMKMMTR ILSYLDEKVL NAIVLMYDAE SRNEGEELDT GRMVKLAQWK NAKQLGVDRF 120
  121 AVSFPIESIG HFHKVKLCFR QITIRDLLYL KEIFMNSSVK REFDIQSRSF DAEKLNETFG 180
  181 YPYTVTENKV KRKKWLFKML VIRHAVVELD YLERIEGERE ITCFKFTQYK VPQEIFDNIP 240
  241 W

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 28.481486
Match: PF01827.18
Description: No description for PF01827.18 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle