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View Structure Prediction Details

Protein: CE36854
Organism: Caenorhabditis elegans
Length: 317 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36854.

Description E-value Query
Range
Subject
Range
gi|49900979 - gi|49900979|gb|AAH75862.1| CAPN1 protein [Homo sapiens]
338.0 [0..4] [316..147]

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Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHGIAQIRL LINGEWKVIK IDFHVPSSSA SYEIFTPMVR KQAWAALIQK AFAKLGGSYA  60
   61 KLHGGFADIA FLQLTGSFTS TYYLNKLSSD NDIWDFILSM QKSKFLVTAC STYCEEGSEE 120
  121 WDIFLKNQIS PNHGHGYTEM GSFTEIRWQV PIGKNILINY DSEKCLCGNI FDYVLSTTSI 180
  181 HWVDLHILSR FFSCFEICHY REGWKEIRFR KTLVPKNGKT EILKLFLKTR CELVIEVIRR 240
  241 KEALRLEAEQ LRNRCILFCI VYSATADNKC DKILMITHAY DLNLELTPGT LDPGTYLISF 300
  301 VILEDYDELE LDWVIRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 90.0
Match: 1u5iA
Description: Crystal Structure analysis of rat m-calpain mutant Lys10 Thr
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.529663942126259 bayes_pls_golite062009
hydrolase activity 0.16837900182603 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle