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View Structure Prediction Details

Protein: CE36840
Organism: Caenorhabditis elegans
Length: 311 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36840.

Description E-value Query
Range
Subject
Range
CE30721 - status:Partially_confirmed UniProt:O76677 protein_id:AAC27089.3
335.0 [0..1] [269..1]

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Predicted Domain #1
Region A:
Residues: [1-311]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQNPTNAQ YSALSLGGPL GSPPSHPGKS IAKITTAFIG ALVVSATILV ALSGTTPSSH  60
   61 LAAPSHEVLA TQDEPIQLEN DSQDKYVEFR YDPISGKYSH VNNDGSRINP FVVKNVERHS 120
  121 EKQYAVYLHK KDSNEEGSIY WKFNLKSTRK ILEKLEIRMV SINNIANGGG KAEACLQPSE 180
  181 TCKDIPVGGV LTLEKPESET LTVGIKLFKN IQLFGRDEKC TECGEFERGF SVKAFWSEVQ 240
  241 LVLLHLQPSE FAIHILFLKL VSINQKIAFE KKMRRRLFGV YMEALVAGQL PFFEFSSNSG 300
  301 FHNPHLKTHY Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.0
Match: 2g9gA
Description: No description for 2g9gA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle