| Protein: | acr-18 |
| Organism: | Caenorhabditis elegans |
| Length: | 510 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-18.
| Description | E-value | Query Range |
Subject Range |
|
|
406.0 | [0..26] | [492..101] |
|
Region A: Residues: [1-354] |
1 11 21 31 41 51
| | | | | |
1 MLIYPCFLIL WQILSSHRVH ATSHPARTPM RNLYEHLFLD YVKEIRPVRN ESESLKVEIK 60
61 FWLKQILKVD ERDQIVNIYC WLELYWIDET LTWDPKKFGN LSRIHVPAHK IWKPDVLVYN 120
121 NANMNVEENE METNAIVDNT GRVMLFRSMI TDISCNLNLQ QFPFDQQICF VTFASWSMDG 180
181 SKLDLSATPK TDNLELYIRN TEWGLTDFRV KIYQKIYDCC PHPFPDVTYF MVLRRSPSYY 240
241 IFSLVIPSAF ITVVTIVGFF TPHSTTGENT EKVSLGVTAL LSMAIIMMMV SDEVPATSEV 300
301 IPLIGKYYIG LIFLIFMAAF TTTLTLSYQM RGNSGQEVDP RVRDFFFYQI AANP
|
| Detection Method: |  |
| Confidence: | 74.09691 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [355-510] |
1 11 21 31 41 51
| | | | | |
1 CISWAFSFQL PKKLLRSDHR KQSFFFTNGA AHVNGYSKGA LHPNTPPAHI VKMEEITGGG 60
61 SVKSFVMSQE SAATSTLLTS SLMKIKVVLD DMKASIHAER ELKRIKFEWQ QVTRLIDRCI 120
121 MFSYILITIA FAMVMLASRD PPIVLNDLIM DSVKST
|
| Detection Method: | |
| Confidence: | 39.045757 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
