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View Structure Prediction Details

Protein: CE36932
Organism: Caenorhabditis elegans
Length: 256 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36932.

Description E-value Query
Range
Subject
Range
gi|39589685, gi|... - gi|39589685|emb|CAE66920.1| Hypothetical protein CBG12308 [Caenorhabditis briggsae], gi|187029448|em...
gi|157746453 - gi|157746453|ref|XP_001668322.1| Hypothetical protein CBG12308 [Caenorhabditis briggsae AF16]
207.0 [0..1] [256..1]

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Predicted Domain #1
Region A:
Residues: [1-74]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTQLAILGW LAVALVVAAA ENKSAYAQAA DNFLDELAGK EVEAVPVPDE KDQNEHHEHS  60
   61 SHGSHAGHGG HEGH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [75-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKMWFHGGF EEVILFDFWR TDSLFGMLLS CAAIFIMGAT YEGVKWFRVF LQMTQTQAQV  60
   61 LANKSCVEFA LQTTRSSGGT CHQSVTHSQS NKPQSEPFLI SASVARTPAT SPFSPQRLIQ 120
  121 MLLYIFQLVL AYWLMLIVMT YNTYLTAAVV LGAGFGHWLF AVLQLRNCDG EVTDSFQTDA 180
  181 CH

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 66.823909
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle