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View Structure Prediction Details

Protein: CE37006
Organism: Caenorhabditis elegans
Length: 635 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37006.

Description E-value Query
Range
Subject
Range
gi|50755587 - gi|50755587|ref|XP_414807.1| PREDICTED: similar to folliculin isoform 1 [Gallus gallus]
665.0 [0..94] [635..190]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAVIALCHF CENHGPRVVM TCQPMRDVDD KGASCTASTS LGPSTSSSPP GIIVPLIKFD  60
   61 GECVVKEKTN TEDGTSYPHY GNCTKFTIDT EDR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [94-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSACSSFRNG PCLLSNDHQT KTSYISSEVA LQDRVYERVK NACLRSLSCE VSAASKKNPV  60
   61 QP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [156-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPPLSRSTT PRKIHPYVIH EEPLHGTRIP PSSTVLQEPI EDGAFEQPLV LKISEIYFEN  60
   61 IDFRAAEEAD GYVIFGDTDN GFCFAYIFRL ADAKARGFYR LFSLIVVSND LTFLTNNFEY 120
  121 FKTTLGGIKN DLQKLAQDVF SREIDTGEKL SEDDIHKPEF QKLVGKMPSW YRRKIAIDTD 180
  181 RNLTVVTANN DIWVQLHRHM MWTLRSPTLA CLDQVMEGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [375-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTQDMMVLLE LEESQIVELE LRHPNQHLVS MAQLANLKII ATQLNTCSEP GDLDLLIRHI  60
   61 VTGGQVVVE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [444-635]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SREKEYCRQF LLAISNLLPI GCIKLATYKE QYLPEYSSRF NLIGGPHNMD IPLEVSDVMV  60
   61 FRVSPRDVSI VDIEQMSLVN CVIEVRRRPE NDGSNGPLPR IVNRYRDLLL DSDVTDTILE 120
  121 TALRTTREGW MLKAKICYQM TKQLSHPQVF EHITGCGVED QQVVSYWTAG LSNAYKLHVL 180
  181 TSIQQSQTST AR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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