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View Structure Prediction Details

Protein: CE36803
Organism: Caenorhabditis elegans
Length: 411 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36803.

Description E-value Query
Range
Subject
Range
gi|46486680 - gi|46486680|gb|AAS98781.1| JamJ [Lyngbya majuscula]
382.0 [0..10] [406..1169]

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Predicted Domain #1
Region A:
Residues: [1-317]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTPFNIARC STRLIRRKPP GGGILDEGVT FSDVHNVILN PTTRLPYPEE QLREHIEKTS  60
   61 SEIMKERNKI RYGTRKKKDS GAIDFSQLPI EEHVVLLFPG QGAQFVGMGQ KVMDIPAARR 120
  121 VFDEASEVLG YDMLKVCQDG PKQKLEQTLY CQPAIVTSSI AAFEALKASD PSIEENLTDT 180
  181 AGFSVGEYAS LVAGKVLSFS DAIKIVKTRA EAMSECAKLV KSGMVTIRVK AASKLDKAMA 240
  241 DARKVAAENR ELVVCEVANY LYCGVRVIGG SETCLKYLEE NQEKYNIQVM KRLAVSAAFH 300
  301 TRQMESAVEQ VAKAFQN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 2uv8G
Description: No description for 2uv8G was found.

Predicted Domain #2
Region A:
Residues: [318-411]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEIHRPVCNV WSNYSGKVMS SKKGDVRGAV AKQINSPVRW EQIQQSLFRK HQNEAFPRFY  60
   61 EVGAGRQLVA ELIFFIVCVI FMLALYIMLA LYLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.39794
Match: 2c2nA
Description: Structure of human mitochondrial malonyltransferase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle