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View Structure Prediction Details

Protein: CE36796
Organism: Caenorhabditis elegans
Length: 241 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36796.

Description E-value Query
Range
Subject
Range
gi|39579516, gi|... - gi|39579516|emb|CAE56341.1| Hypothetical protein CBG24013 [Caenorhabditis briggsae], gi|187040564|em...
311.0 [0..11] [241..31]

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Predicted Domain #1
Region A:
Residues: [1-241]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLGKNFLVI FCSCVLFLAQ CAYFLSIFTR KPMGNVVEIP IANFTTELIP GDSITKFIPP  60
   61 FVPLLNDYVV AEGYSLHGCI VRKSMSQLNT NIMCYLNNTS LYEQQNHTLS DTWEDRNTNS 120
  121 CYDCKDVSCA VKMIYERLMY HVKNRHLIDK DDEPTWWFDW HAAPQTWNCD FYKYLTDYHL 180
  181 IKIGTTQKDR RFAMKQLQKA LKLANVEDEY ARKIADDTLK SDTRHGTHKS DWSKKILEQV 240
  241 K

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 53.29243
Match: PF04590.7
Description: No description for PF04590.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle