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View Structure Prediction Details

Protein: CE36983
Organism: Caenorhabditis elegans
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36983.

Description E-value Query
Range
Subject
Range
gi|145047589, gi... - gi|145589183|ref|YP_001155780.1| nitrite reductase (NAD(P)H), large subunit [Polynucleobacter necess...
232.0 [0..2] [448..5]

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Predicted Domain #1
Region A:
Residues: [1-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYIIVGGGI AGVSCASQML QLERSANLEV IIISASSFVK SVENYQKIGQ YGEKFDVKET  60
   61 NCHELFPDSR IRFLNDTVVT WDSSKNEIHL QNNEKLKYDK LCIATGSRPK FQKELGIDRR 120
  121 IVFLRDTQSA IQLKTKLKNA KNILIVGNGG IATELIFELK TFDVTWLIKD PWICASFFPE 180
  181 DIEQFIEKRL LKGRIDGNKH DGQQKHLQHV AASESVSENM NNPSGPALGP DWCSQIDFQK 240
  241 ISEKSENRSV TILRNCVITS TDTSQNLSVH YMDKEKMADN QLNPDIFIWA GGVTANSEVW 300
  301 AMNKMLQITE NSGIKVNDAC ETSLPNVFAC GDVCALTTTE PSTLWQQRQL WTQARQQGEV 360
  361 CGRAMVAGVE EARMQNMYFE LFSHCTTFFG DADNDQLVRC VVVKNKIVGA LLIGETDMEE 420
  421 TLENLILNKT DLEGISETFL EPGVDLDDYF D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.045757
Match: 1q1rA
Description: Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on NADH or NADPH 0.37811843978895 bayes_pls_golite062009
catalytic activity 0.32356863936794 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 0.182584103050529 bayes_pls_golite062009
binding 0.16859261172935 bayes_pls_golite062009
oxidoreductase activity 0.0235219897421068 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle