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View Structure Prediction Details

Protein: glb-5
Organism: Caenorhabditis elegans
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-5.

Description E-value Query
Range
Subject
Range
gi|27574241 - gi|27574241|pdb|1O1M|A Chain A, Deoxy Hemoglobin (A-Glyglygly-C:v1m,L29f,H58q B,D:v1m,V67w)
261.0 [0..35] [349..1]

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Predicted Domain #1
Region A:
Residues: [1-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSAKPRPLS AINEEIREYD QLSRELEKDY RRSMRIVDDD FELARTHWIQ LQKSNKQGLA  60
   61 IRGCFLTMLE KYPQVRPIWG FGKRIEGRGD ETWKPEIVED FYFRHHCASL QAALNMIIQN 120
  121 KDDKSGMRRM LNEMGAHHFF YDACEPHFEV FQDSLLESMK LVLNGGDSLD DDIEQSWICL 180
  181 LQTIRLHMGE GIEIQRANYL TQCLIPKEME EVRANWMQVE NYGFRKAGLL LCQSAFDNYS 240
  241 ELLKTHNLSM TLPIEANKTS DSFVALSDQI MQALDKTIQS YTPEEGFLNL IQEIKDFVIK 300
  301 FLVVEVCPPL IRKSFIDGLI HMLCKILSIK HVKEDFLHIW KKVYRVMEQA MVANIVEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.69897
Match: 1o1mA
Description: Hemoglobin, alpha-chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle