| Protein: | sol-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 594 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sol-1.
| Description | E-value | Query Range |
Subject Range |
|
|
487.0 | [0..24] | [594..495] |
|
Region A: Residues: [1-277] |
1 11 21 31 41 51
| | | | | |
1 MCRRAEDLVL LLIPILFGYF SHASEHECKC VLFNVTSGNF HSPEFPAPLE GVPCLFYHFQ 60
61 APPDHIIRLT FDVFQLPPRI GVCSSSIMLF DHSTDGLIEF GERADFEFCG KEISSGRQFF 120
121 SKDQHFLLQI SSGKESSRGF RGSFLAIPKK NFTSDAVEMA ECSYRVEKQK AIIYSPDYPY 180
181 YYPSKVNCTY HIPQRKGFQI VVNSIVMDIG RDAILQIFES VEGKFEKRLI EMVTSVQKSI 240
241 YVSSTSSLLI YFSAGNNDVE RAVGFVIELQ YSNAVWS
|
| Detection Method: |  |
| Confidence: | 38.0 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [278-594] |
1 11 21 31 41 51
| | | | | |
1 QSPETASECQ LNINSENFKE GQLSSDKIGR FTSSSLPTKC QIVLQGYPNE KISVKFTHFN 60
61 LYVPDNKNVT KRCTEVDNLS ADVRVGSRLS RIDEWCGKRA PPNLMSSSNL LQLEYNTKSS 120
121 KAIRESTNDD IGFRLDYKFH TDWNMGNMKA KVDKKKECRF SFNSSEHTNG KLWSANYPGL 180
181 YPRNLYCEYI FHGRNDQVVH IHFEYFDIEG FNQCDETTQS DYILFSNYQT HDRTNRRFCG 240
241 KTAPKGPILS ESNYFRMIFS TNDIFDATGF YAHYQFITQE KSQISRVKLT ISSSQTPFSS 300
301 FFLVILLFTF RYIANIF
|
| Detection Method: | |
| Confidence: | 7.73 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.188878258361535 | bayes_pls_golite062009 |
