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View Structure Prediction Details

Protein: CE36975
Organism: Caenorhabditis elegans
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36975.

Description E-value Query
Range
Subject
Range
gi|38036062 - gi|38036062|gb|AAR08414.1| metal transport protein [Medicago truncatula]
186.0 [0..2] [331..57]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEGGYLALQ SVLALVLLVV TAVAGSAPLL LLTFLKKKGK DQNDSGWLSY LSCFSGGVFM  60
   61 ATCFLDVMPH VQQTYGEILE TYNVEFRLPM NQLFICVGFF FVYLIEEITA KVFGSGGHGH 120
  121 SHGPPIPLTV DIKKEKVTRV QLIENGSSSS PETLMIPID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [160-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRTRHSLVVE ETAPWVVSDE KRNLLKSLTF AIAMSFHSLL EGFALGVQDS DAAIWTLFLS  60
   61 LLLHKSIEAF SVGLQISRAN TEKKGIVMCT ILVYALMTPL GSVLGTLLQN TGDKSFGKDC 120
  121 TIVFLEAMAA GTFIYVTFLE ILAAEKENRF NSLKQLLCIG LGFMVILALQ FFFGHEGHGH 180
  181 GHPDHGVPSP SALPSPSFSF APAV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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