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View Structure Prediction Details

Protein: srz-4
Organism: Caenorhabditis elegans
Length: 352 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srz-4.

Description E-value Query
Range
Subject
Range
srz-60 - 7TM chemoreceptor, srz family status:Partially_confirmed UniProt:O44454 protein_id:AAB92022.2
207.0 [0..1] [313..1]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTLRLQDL PNAYLVIGGI GAVLLIIYLI SIIVIFPLYV YVYRLNRKTE KLAYFYPITK  60
   61 HFYSVICSMQ FYIYVTLSIG AITWLFFDLT AAGCVFIVSL FFAYFVAITV TSVQNVLLFI 120
  121 LALRLFMILF FPNFKKVISI NQKSFQATRN LLYIVYSLIQ IISKLVKIFC GTESAAYGRI 180
  181 YVAGDILVMF AAIMYVIMFM KIRRWSKMTG DQLNNPEKYI FYQTVLIVVT KLLAINVILV 240
  241 MCY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [244-352]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDGYSDDWAF GAFVVSDVLT TPFVIQGSYL LCNRTNVDTV LSIQFKTMKT WKMIICGLGS  60
   61 VAEGRQRRRE FKMRIYAAKK KAKDLIRGSG KDGTISKPGA YIIPVAQTP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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