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View Structure Prediction Details

Protein: hse-5
Organism: Caenorhabditis elegans
Length: 616 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hse-5.

Description E-value Query
Range
Subject
Range
GLCE_MOUSE - D-glucuronyl C5-epimerase OS=Mus musculus GN=Glce PE=1 SV=2
916.0 [0..1] [616..1]

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Predicted Domain #1
Region A:
Residues: [1-155]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCLRWRSNR HRIYLLVACG ALFLLNRHLT QEESRIDEED EELTQVDVNE DDKKIECEPP  60
   61 GSIESKCIAD NGKSMKCWKD EEDVYFPVSY LKKRFDMTGK LGKDGSTFEL YTSYAKMRSP 120
  121 DSTYDPLGPF GHFSTYSVET RDRVRCVSAK TDVPM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [156-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 STQWDPIPYY YPIQISQYGL QHYSRMKLDS ISNKSEASPK DDVILGVNSK EWKGAAGMHE  60
   61 TTERLFFNDE QMGKVVNISA GAALANAGAY VYLDKSPDLH VISFDWKPYE ANSSFTVLAK 120
  121 MKQDDLLVLI NYVYSEGNGK CVWQEEERIS DDYIVQKPKK DGQVSYSYSY IGNSPIGEWS 180
  181 TVTRDLLVDV ARALSSGDNR KKDDNVVLHA GDLRLVSLGF RGELTVKQKI TQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [388-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RREQHSHAFY AAADWLVKNQ NDRGGWSVPV ERSIAERKLV LPPGWHSAMA QGHGISVLTR  60
   61 AFKHFNDEKY LKSAAKALKL FKINSSDGGV RGEFFGNIWY EEYPTTPGSF VLNGFLYSLI 120
  121 GLYDLSQLEL MIDENDETMR AKIQEAQELY SAGVRSLKQL LPLYDTGSGT IYDLRHVALG 180
  181 TAPNLARWDY HAVHVYLLKW IAGIEKDEVL SKTADRWIGY AYGKRAKHN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 138.040959
Match: PF06662.4
Description: No description for PF06662.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle