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View Structure Prediction Details

Protein: CE36908
Organism: Caenorhabditis elegans
Length: 745 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36908.

Description E-value Query
Range
Subject
Range
CE34238 - status:Partially_confirmed UniProt:Q2MGE6 protein_id:ABC71845.1
724.0 [0..26] [745..1]

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Predicted Domain #1
Region A:
Residues: [1-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASCSSSQE NEASRASTLE KISLKMSEDA DLKIFMDFLV EKTKDAFQPM IAVQVFREYL  60
   61 NEKSHLHDYH YKRFCCDLAP NMNEWNNYSI EARIRLMYAL GGKVESDFLE RIETHGTVEL 120
  121 NKKRKITKYT SNDGILSLQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 56.346787
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [140-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNRVHFTRFM DFLIQKTKYA VEPMNFNQVL EEFCRLEPDC RHYGVYYVRF HHKLAPNMDA  60
   61 LNNYNIYDRI RLMFVLNGKV SGDFFKTIKT HGTVELDRKK KITKYVSNDG KLKLGG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 66.657577
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [256-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NIISDTRLMD FLIQKTRHSV EPMQATNLIF KEFSERPSRI LDKMYQLRFY QKLAPNMNEW  60
   61 NRYSIEQRIR LMFVLKGKVA DDFLKTIPIL SMAKRIMICR IETHGTVELD EKRRIRKYTS 120
  121 NDGKLSLKKP 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 59.283997
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [386-538]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTDDTSCPTN IRFMDFLIQN TKDGAESIRL IYNEFALLEG NVLSASTYSS RFCKKLAPKM  60
   61 SQWSNYRIED RIRMMFALKG KVESDFLAQM IQSGAVQLDE NYRIVRYTSN NGKVELSEKR 120
  121 SGVKRRSSTK SSKTLGKRRQ VIEKELSDLD EPE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 57.283997
Match: PF04435.9
Description: No description for PF04435.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [539-745]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FVGIMHGYPK QEPVYEEIIN QDMRYNNEDP HIPPEIEQFP IQAVHLEEPK FDPISSMNIG  60
   61 RGTLAQRFGT TSSESDGISV HNFLISLELI LTSLESDTLI DLMREIKELR NRTNDEILPP 120
  121 DLVIPALQTC FMGITRKFRP EVSAPSKSAG ECLRILKYSL LWLQSPLLYD LQKRVQEEIE 180
  181 NCGADGKVIP IADIQQGIRN ILFAVSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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