| Protein: | CPT1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 393 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPT1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-95 | [1..393] | [15..407] |
|
|
2.0E-90 | [1..391] | [1..388] |
|
|
1.0E-88 | [1..392] | [1..389] |
|
|
3.0E-87 | [1..391] | [1..388] |
|
|
2.0E-86 | [1..391] | [1..388] |
|
|
2.0E-85 | [4..388] | [42..407] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MGFFIPQSSL GNLKLYKYQS DDRSFLSNHV LRPFWRKFAT IFPLWMAPNL VTLLGFCFII 60
61 FNVLTTLYYD PYFDQES
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.764 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.722 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.683 | N/A | N/A | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.622 | N/A | N/A | a.64.1 | Saposin |
| View | Download | 0.615 | N/A | N/A | a.46.1 | Methionine synthase domain |
|
Region A: Residues: [78-251] |
1 11 21 31 41 51
| | | | | |
1 PRWTYFSYAI GLFLYQTFDA CDGMHARRTG QQGPLGELFD HCIDSINTTL SMIPVCSMTG 60
61 MGYTYMTIFS QFAILCSFYL STWEEYHTHK LYLAEFCGPV EGIIVLCISF IAVGIYGPQT 120
121 IWHTKVAQFS WQDFVFDVET VHLMYAFCTG ALIFNIVTAH TNVVRYYESQ STKS
|
| Detection Method: | |
| Confidence: | 26.721246 |
| Match: | PF01066.9 |
| Description: | No description for PF01066.9 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [252-393] |
1 11 21 31 41 51
| | | | | |
1 ATPSKTAENI SKAVNGLLPF FAYFSSIFTL VLIQPSFISL ALILSIGFSV AFVVGRMIIA 60
61 HLTMQPFPMV NFPFLIPTIQ LVLYAFMVYV LDYQKGSIVS ALVWMGLGLT LAIHGMFIND 120
121 IIYDITTFLD IYALSIKHPK EI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.931 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.912 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.885 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.869 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.862 | N/A | N/A | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
