YRC Public Data Repository - Protein Structure Prediction

Protein:	HSP150
Organism:	Saccharomyces cerevisiae
Length:	387 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HSP150.

Description	E-value	Query Range	Subject Range
HSP150 - O-mannosylated heat shock protein that is secreted and covalently attached to the cell wall via beta...	8.0E-74	[1..387]	[1..387]
gi\|45190496, gi\|... - gi\|45190496\|ref\|NP_984750.1\| AEL111Cp [Ashbya gossypii ATCC 10895], gi\|44983438\|gb\|AAS52574.1\| AEL11... gi\|44983438 - gi\|44983438\|gb\|AAS52574.1\| AEL111Cp [Ashbya gossypii ATCC 10895]	2.0E-61	[1..387]	[1..348]
orf19.7851 - PIR1 CGDID:CAL0003915 Assembly 19, Contig19-20045 (52307, 53464) CDS, translated using codon table 1... gi\|46433974, gi\|... - gi\|68487146\|ref\|XP_712576.1\| hypothetical protein CaO19.7851 [Candida albicans SC5314], gi\|46433974\|...	1.0E-60	[1..387]	[1..385]

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Predicted Domain #1

Region A:
Residues: [1-229]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYKKTLVAS ALAATTLAAY APSEPWSTLT PTATYSGGVT DYASTFGIAV QPISTTSSAS  60
   61 SAATTASSKA KRAASQIGDG QVQAATTTAS VSTKSTAAAV SQIGDGQIQA TTKTTAAAVS 120
  121 RDGQIQATTK TTSAKTTAAA VSQISDGQIQ ATTTTLAPKS TAAAVSQIGD GQVQATTKTT 180
  181 AAAVSQIGDG QVQATTKTTA AAVSQIGDGQ VQATTKTTAA AVSQIGDGQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [230-387]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VQATTKTTAA AVSQITDGQV QATTKTTQAA SQVSDGQVQA TTATSASAAA TSTDPVDAVS  60
   61 CKTSGTLEMN LKGGILTDGK GRIGSIVANR QFQFDGPPPQ AGAIYAAGWS ITPDGNLAIG 120
  121 DNDVFYQCLS GTFYNLYDEH IGSQCTPVHL EAIDLIDC

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits