| Protein: | BRN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 754 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BRN1.
| Description | E-value | Query Range |
Subject Range |
|
|
816.0 | [0..27] | [754..1] |
|
|
700.0 | [0..6] | [745..105] |
|
|
680.0 | [0..2] | [752..84] |
|
|
634.0 | [0..4] | [745..88] |
|
|
630.0 | [0..1] | [745..1] |
|
|
630.0 | [0..2] | [746..87] |
|
|
629.0 | [0..2] | [746..81] |
|
Region A: Residues: [1-235] |
1 11 21 31 41 51
| | | | | |
1 MTTQLRYENN DDDERVEYNL FTNRSTMMAN FEEWIKMATD NKINSRNSWN FALIDYFYDL 60
61 DVLKDGENNI NFQKASATLD GCIKIYSSRV DSVTTETGKL LSGLAQRKTN GASNGDDSNG 120
121 GNGEGLGGDS DEANIEIDPL TGMPISNDPD VNNTRRRVYN RVLETTLVEF ETIKMKELDQ 180
181 ELIIDPLFKK ALVDFDEGGA KSLLLNTLNI DNTARVIFDA SIKDTQNVGQ GKLQR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [236-387] |
1 11 21 31 41 51
| | | | | |
1 KEEELIERDS LVDDENEPSQ SLISTRNDST VNDSVISAPS MEDEILSLGM DFIKFDQIAV 60
61 CEISGSIEQL RNVVEDINQA KDFIENVNNR FDNFLTEEEL QAAVPDNAED DSDGFDMGMQ 120
121 QELCYPDENH DNTSHDEQDD DNVNSTTGSI FE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [388-504] |
1 11 21 31 41 51
| | | | | |
1 KDLMAYFDEN LNRNWRGREH WKVRNFKKAN LVNKESDLLE ETRTTIGDTT DKNTTDDKSM 60
61 DTKKKHKQKK VLEIDFFKTD DSFEDKVFAS KGRTKIDMPI KNRKNDTHYL LPDDFHF
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.524 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.524 | a.24.15 | FAD-dependent thiol oxidase |
| View | Download | 0.430 | d.26.1 | FKBP-like |
| View | Download | 0.393 | a.29.8 | Description not found. |
| View | Download | 0.388 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.355 | d.370.1 | Description not found. |
| View | Download | 0.338 | d.26.1 | FKBP-like |
| View | Download | 0.332 | a.74.1 | Cyclin-like |
| View | Download | 0.316 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.290 | b.60.1 | Lipocalins |
|
Region A: Residues: [505-630] |
1 11 21 31 41 51
| | | | | |
1 STDRITRLFI KPAQKMSLFS HRKHTRGDVS SGLFEKSTVS ANHSNNDIPT IADEHFWADN 60
61 YERKEQEEKE KEQSKEVGDV VGGALDNPFE DDMDGVDFNQ AFEGTDDNEE ASVKLDLQDD 120
121 EDHKFP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [631-754] |
1 11 21 31 41 51
| | | | | |
1 IRENKVTYSR VSKKVDVRRL KKNVWRSINN LIQEHDSRKN REQSSNDSET HTEDESTKEL 60
61 KFSDIIQGIS KMYSDDTLKD ISTSFCFICL LHLANEHGLQ ITHTENYNDL IVNYEDLATT 120
121 QAAS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.401 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.377 | a.24.3 | Cytochromes |
| View | Download | 0.377 | a.24.3 | Cytochromes |
| View | Download | 0.362 | a.60.8 | HRDC-like |
| View | Download | 0.332 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.332 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.301 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.301 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.295 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.285 | a.7.1 | Spectrin repeat |
