YRC Public Data Repository - Protein Structure Prediction

Protein:	YGR296C-B, YER19...
Organism:	Saccharomyces cerevisiae
Length:	160 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR296C-B, YER19....

Description	E-value	Query Range	Subject Range
YBL113W-A - [DUBIOUS] Dubious open reading frame unlikely to encode a protein; identified by gene-trapping, micr... YB13A_YEAST - Putative UPF0479 protein YBL113W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBL11...	282.0	[0..1]	[160..1]

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Predicted Domain #1

Region A:
Residues: [1-160]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF FVPVQKVLQH  60
   61 LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN CFSSSSNGQV PSIISLYLRV 120
  121 DLSPFYAKIF QISYRVPMIW LDVFQVFFVF LVISQHSLHS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits