YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YDR134C
Organism: Saccharomyces cerevisiae
Length: 136 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR134C.

Description E-value Query
Range
Subject
Range
gi|90103014 - gi|90103014|sp|Q7LHD1.2|YD134_YEAST RecName: Full=Uncharacterized cell wall protein YDR134C; Flags: ...
CCW22_YEAST - Putative covalently bound cell wall protein 22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S28...
104.0 [0..1] [118..1]
gi|44985927 - gi|44985927|gb|AAS54538.1| AGR049Wp [Ashbya gossypii ATCC 10895]
gi|45201144, gi|... - gi|45201144|ref|NP_986714.1| AGR049Wp [Ashbya gossypii ATCC 10895], gi|44985927|gb|AAS54538.1| AGR04...
75.0 [0..1] [103..1]
gi|49645116, gi|... - gi|50311897|ref|XP_455980.1| unnamed protein product [Kluyveromyces lactis], gi|49645116|emb|CAG9868...
gi|49645116 - gi|49645116|emb|CAG98688.1| KLLA0F20031p [Kluyveromyces lactis]
61.0 [0..1] [92..1]
gi|49529165 - gi|49529165|emb|CAG62831.1| unnamed protein product [Candida glabrata]
gi|49529165, gi|... - gi|50294880|ref|XP_449851.1| hypothetical protein CAGL0M11726g [Candida glabrata CBS138], gi|4952916...
60.0 [0..1] [111..1]

Back

Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFSTVASIA AIAAVASAAS NITTATVTEE STTLVTITSC EDHVCSETVS PALVSTATVT  60
   61 VNDVIT*YTT WCPLPTTEAP KNTTSPAPTE KPTEKPTEKP TQQGSSTQTV TSYTGAAVKA 120
  121 LPAAGALLAG AAALL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.458 c.97.1 Cytidine deaminase-like
View Download 0.433 d.140.1 Ribosomal protein S8
View Download 0.433 d.140.1 Ribosomal protein S8
View Download 0.426 c.78.1 Aspartate/ornithine carbamoyltransferase
View Download 0.426 c.78.1 Aspartate/ornithine carbamoyltransferase
View Download 0.411 f.1.4 Bcl-2 inhibitors of programmed cell death
View Download 0.376 d.198.3 Description not found.
View Download 0.344 d.199.1 DNA-binding C-terminal domain of the transcription factor MotA
View Download 0.332 d.129.2 Phosphoglucomutase, C-terminal domain
View Download 0.321 a.25.1 Ferritin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle