| Protein: | BBC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 771 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BBC1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-45 | [247..745] | [535..1021] |
|
|
2.0E-44 | [32..723] | [19..720] |
|
Region A: Residues: [1-369] |
1 11 21 31 41 51
| | | | | |
1 MSEPEVPFKV VAQFPYKSDY EDDLNFEKDQ EIIVTSVEDA EWYFGEYQDS NGDVIEGIFP 60
61 KSFVAVQGSE VGKEAESSPN TGSTEQRTIQ PEVEQKDLPE PISPETKKET LSGPVPVPAA 120
121 TVPVPAATVP VPAATAVSAQ VQHDSSSGNG ERKVPMDSPK LKARLSMFNQ DITEQVPLPK 180
181 STHLDLENIP VKKTIVADAP KYYVPPGIPT NDTSNLERKK SLKENEKKIV PEPINRAQVE 240
241 SGRIETENDQ LKKDLPQMSL KERIALLQEQ QRLQAAREEE LLRKKAKLEQ EHERSAVNKN 300
301 EPYTETEEAE ENEKTEPKPE FTPETEHNEE PQMELLAHKE ITKTSREADE GTNDIEKEQF 360
361 LDEYTKENQ
|
| Detection Method: |  |
| Confidence: | 13.62 |
| Match: | 1k83A |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [370-668] |
1 11 21 31 41 51
| | | | | |
1 KVEESQADEA RGENVAEESE IGYGHEDREG DNDEEKEEED SEENRRAALR ERMAKLSGAS 60
61 RFGAPVGFNP FGMASGVGNK PSEEPKKKQH KEKEEEEPEQ LQELPRAIPV MPFVDPSSNP 120
121 FFRKSNLSEK NQPTETKTLD PHATTEHEQK QEHGTHAYHN LAAVDNAHPE YSDHDSDEDT 180
181 DDHEFEDAND GLRKHSMVEQ AFQIGNNESE NVNSGEKIYP QEPPISHRTA EVSHDIENSS 240
241 QNTTGNVLPV SSPQTRVARN GSINSLTKSI SGENRRKSIN EYHDTVSTNS SALTETAQD
|
| Detection Method: | |
| Confidence: | 2.221849 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [669-771] |
1 11 21 31 41 51
| | | | | |
1 ISMAAPAAPV LSKVSHPEDK VPPHPVPSAP SAPPVPSAPS VPSAPPVPPA PPALSAPSVP 60
61 STQYLQYLQH LQHSQHLQYL QYLQHLQHLQ HLQRLLRCLN TMK
|
| Detection Method: | |
| Confidence: | 9.6 |
| Match: | 1ldvA |
| Description: | No description for 1ldvA was found. |
