YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YCR103C
Organism: Saccharomyces cerevisiae
Length: 111 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCR103C.

Description E-value Query
Range
Subject
Range
YIW0_YEAST - Putative UPF0377 protein YIR040C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIR040C...
YIR040C - [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on experimental and compara...
176.0 [0..1] [111..1]

Back

Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMLLFLNES YIFHRFRMWS IVLWHSCVFV CAECGNANYR GAGVPCKTLL RAPVKFPLSV  60
   61 KKNIRILDLD PRSEAYCLSL NSVCFKRLPR KKYFHLLNSY NIKRVLGVVY C

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.627 a.138.1 Multiheme cytochromes
View Download 0.551 a.138.1 Multiheme cytochromes
View Download 0.517 a.77.1 DEATH domain
View Download 0.497 a.24.3 Cytochromes
View Download 0.451 d.80.1 Tautomerase/MIF
View Download 0.451 d.80.1 Tautomerase/MIF
View Download 0.380 d.203.1 DsrC, the gamma subunit of dissimilatory sulfite reductase
View Download 0.368 a.1.1 Globin-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle