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View Structure Prediction Details

Protein: AI5L3_ARATH
Organism: Arabidopsis thaliana
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AI5L3_ARATH.

Description E-value Query
Range
Subject
Range
gi|26451276 - gi|26451276|dbj|BAC42739.1| putative bZIP transcription factor AtbZIP12 / DPBF4 [Arabidopsis thalian...
188.0 [0..1] [262..1]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSIRGNIEE PISQSLTRQN SLYSLKLHEV QTHLGSSGKP LGSMNLDELL KTVLPPAEEG  60
   61 LVRQGSLTLP RDLSKKTVDE VWRDIQQDKN GNGTSTTTTH KQPTLGEITL EDLLLRAGVV 120
  121 TETVVPQENV VNIASNGQWV EYHHQPQQQQ GFMTYPVCEM QDMVMMGGLS DTPQAP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRKRVAGEIV EKTVERRQKR MIKNRESAAR SRARKQAYTH ELEIKVSRLE EENEKLRRLK  60
   61 EVEKILPSEP PPDPKWKLRR TNSASL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.69897
Match: 1hjbA
Description: C/ebp beta
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle