| Protein: | AB40G_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1423 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AB40G_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
935.0 | [0..1] | [1423..9] |
|
|
898.0 | [0..1] | [1423..13] |
|
|
896.0 | [0..1] | [1423..13] |
|
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894.0 | [0..1] | [1423..9] |
|
|
893.0 | [0..1] | [1423..12] |
|
|
890.0 | [0..2] | [1423..7] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI 60
61 LTASHAGGPI NEIDIQKLGF QD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.421 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.306 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.293 | a.276.1 | Description not found. |
| View | Download | 0.261 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.260 | a.230.1 | Description not found. |
| View | Download | 0.219 | a.21.1 | HMG-box |
| View | Download | 0.205 | a.77.1 | DEATH domain |
|
Region A: Residues: [83-427] |
1 11 21 31 41 51
| | | | | |
1 TKKLLERLIK VGDDEHEKLL WKLKKRIDRV GIDLPTIEVR FDHLKVEAEV HVGGRALPTF 60
61 VNFISNFADK FLNTLHLVPN RKKKFTILND VSGIVKPGRM ALLLGPPSSG KTTLLLALAG 120
121 KLDQELKQTG RVTYNGHGMN EFVPQRTAAY IGQNDVHIGE MTVRETFAYA ARFQGVGSRY 180
181 DMLTELARRE KEANIKPDPD IDIFMKAMST AGEKTNVMTD YILKILGLEV CADTMVGDDM 240
241 LRGISGGQKK RVTTGEMLVG PSRALFMDEI STGLDSSTTY QIVNSLRNYV HIFNGTALIS 300
301 LLQPAPETFN LFDDIILIAE GEIIYEGPRD HVVEFFETMG FKCPP
|
| Detection Method: | |
| Confidence: | 42.0 |
| Match: | 2cbzA |
| Description: | No description for 2cbzA was found. |
|
Region A: Residues: [428-518] |
1 11 21 31 41 51
| | | | | |
1 RKGVADFLQE VTSKKDQMQY WARRDEPYRF IRVREFAEAF QSFHVGRRIG DELALPFDKT 60
61 KSHPAALTTK KYGVGIKELV KTSFSREYLL M
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.605 | c.47.1 | Thioredoxin-like |
| View | Download | 0.378 | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.371 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.363 | a.29.2 | Bromodomain |
| View | Download | 0.357 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.315 | a.77.1 | DEATH domain |
| View | Download | 0.308 | c.47.1 | Thioredoxin-like |
| View | Download | 0.304 | a.3.1 | Cytochrome c |
| View | Download | 0.304 | a.3.1 | Cytochrome c |
| View | Download | 0.303 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.230 | a.74.1 | Cyclin-like |
| View | Download | 0.230 | a.74.1 | Cyclin-like |
|
Region A: Residues: [519-1084] |
1 11 21 31 41 51
| | | | | |
1 KRNSFVYYFK FGQLLVMAFL TMTLFFRTEM QKKTEVDGSL YTGALFFILM MLMFNGMSEL 60
61 SMTIAKLPVF YKQRDLLFYP AWVYSLPPWL LKIPISFMEA ALTTFITYYV IGFDPNVGRL 120
121 FKQYILLVLM NQMASALFKM VAALGRNMIV ANTFGAFAML VFFALGGVVL SRDDIKKWWI 180
181 WGYWISPIMY GQNAILANEF FGHSWSRAVE NSSETLGVTF LKSRGFLPHA YWYWIGTGAL 240
241 LGFVVLFNFG FTLALTFLNS LGKPQAVIAE EPASDETELQ SARSEGVVEA GANKKRGMVL 300
301 PFEPHSITFD NVVYSVDMPQ EMIEQGTQED RLVLLKGVNG AFRPGVLTAL MGVSGAGKTT 360
361 LMDVLAGRKT GGYIDGNITI SGYPKNQQTF ARISGYCEQT DIHSPHVTVY ESLVYSAWLR 420
421 LPKEVDKNKR KIFIEEVMEL VELTPLRQAL VGLPGESGLS TEQRKRLTIA VELVANPSII 480
481 FMDEPTSGLD ARAAAIVMRT VRNTVDTGRT VVCTIHQPSI DIFEAFDELF LLKRGGEEIY 540
541 VGPLGHESTH LINYFESIQG INKITE
|
| Detection Method: | |
| Confidence: | 86.522879 |
| Match: | 2hydA |
| Description: | No description for 2hydA was found. |
|
Region A: Residues: [1085-1143] |
1 11 21 31 41 51
| | | | | |
1 GYNPATWMLE VSTTSQEAAL GVDFAQVYKN SELYKRNKEL IKELSQPAPG SKDLYFPTQ
|
| Detection Method: | |
| Confidence: | 62.221849 |
| Match: | 1q1bA |
| Description: | Crystal structure of E. coli MalK in the nucleotide-free form |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [1144-1334] |
1 11 21 31 41 51
| | | | | |
1 YSQSFLTQCM ASLWKQHWSY WRNPPYTAVR FLFTIGIALM FGTMFWDLGG KTKTRQDLSN 60
61 AMGSMYTAVL FLGLQNAASV QPVVNVERTV FYREQAAGMY SAMPYAFAQV FIEIPYVLVQ 120
121 AIVYGLIVYA MIGFEWTAVK FFWYLFFMYG SFLTFTFYGM MAVAMTPNHH IASVVSSAFY 180
181 GIWNLFSGFL I
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [1335-1423] |
1 11 21 31 41 51
| | | | | |
1 PRPSMPVWWE WYYWLCPVAW TLYGLIASQF GDITEPMADS NMSVKQFIRE FYGYREGFLG 60
61 VVAAMNVIFP LLFAVIFAIG IKSFNFQKR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
