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View Structure Prediction Details

Protein: MPCP1_ARATH
Organism: Arabidopsis thaliana
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MPCP1_ARATH.

Description E-value Query
Range
Subject
Range
SCMC1_RABIT - Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1
284.0 [0..4] [291..180]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVKSKLDE ELSSPWFYTV CTMGGMLSAG TTHLAITPLD VLKVNMQVNP VKYNSIPSGF  60
   61 STLLREHGHS YLWRGWSGKL LGYGVQGGCR FGLYEYFKTL YSDVLPNHNR TSIYFLSSAS 120
  121 AQIFADMALC PFEAIKVRVQ TQPMFAKGLL DGFPRVYRSE GLAGFHRGLF PLWCRNLPFS 180
  181 MVMFSTFEQS VEFIYQKIIQ KRKQDCSKAQ QLGVTCLAGY TAGAVGTIIS NPADVVLSSL 240
  241 YNNKAKNVLQ AVRNIGFVGL FTRSLPVRIT IVGPVITLQW FFYDAIKVLS GFPTSGGVKK 300
  301 PVDAAKLSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.154902
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle