| Protein: | RETIC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 432 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RETIC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
532.0 | [0..1] | [347..1] |
|
|
456.0 | [0..140] | [432..107] |
|
|
456.0 | [0..140] | [432..107] |
|
|
409.0 | [0..165] | [432..1] |
|
Region A: Residues: [1-135] |
1 11 21 31 41 51
| | | | | |
1 MAGCAMNLQF SSVVKVRNEI SSFGICNRDF VFRDLAKAMK VPVLRIRGGS GRQRSRLFVV 60
61 NMSQSPIEPQ SGGFAATEQI KGEGDNSILG KDNVRNLGTD QLENLDIDGN VGDGFNGSDG 120
121 NGGGGGGGNG GEGDG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.466 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.466 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.444 | c.97.1 | Cytidine deaminase-like |
| View | Download | 0.418 | a.118.8 | TPR-like |
| View | Download | 0.418 | a.118.8 | TPR-like |
| View | Download | 0.409 | d.17.4 | NTF2-like |
| View | Download | 0.376 | a.118.8 | TPR-like |
| View | Download | 0.369 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.361 | a.118.8 | TPR-like |
|
Region A: Residues: [136-210] |
1 11 21 31 41 51
| | | | | |
1 EGEDYEEKEF GPILKFEEVM KETEARGATL PSDMLEAAKN YGIRKVLLLR YLDLQSSAGL 60
61 LGFAIRSWAM LRNRM
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.817 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.778 | N/A | N/A | a.280.1 | Description not found. |
| View | Download | 0.759 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.759 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.650 | N/A | N/A | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.650 | N/A | N/A | a.23.4 | Mitochondrial import receptor subunit Tom20 |
| View | Download | 0.636 | N/A | N/A | a.5.2 | UBA-like |
| View | Download | 0.621 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.621 | N/A | N/A | a.144.1 | PABC (PABP) domain |
|
Region A: Residues: [211-432] |
1 11 21 31 41 51
| | | | | |
1 LADPSFLFKI GAEIVIDSCC ATVAEVQKRG KDFWAEFELY VADLLVGTVV NIALVGMLAP 60
61 YVRFGQPSAS PGFLGRMVFA YNALPSSVFE AERPGCRFSA QQRLATYFYK GIMYGAVGFG 120
121 CGIVGQGIAN LIMTAKRNIN KSEENIPVPP LIKSAALWGV FLSVSSNTRY QIINGLERVV 180
181 EASPFAKKFP PAAMAFTVGV RLANNIYGGM QFVDWARLSG CQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
