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View Structure Prediction Details

Protein: CDPKG_ARATH
Organism: Arabidopsis thaliana
Length: 571 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDPKG_ARATH.

Description E-value Query
Range
Subject
Range
gi|125545976 - gi|125545976|gb|EAY92115.1| hypothetical protein OsI_13822 [Oryza sativa Indica Group]
gi|115455805, gi... - gi|50355719|gb|AAT75244.1| putative calcium-dependent protein kinase [Oryza sativa (japonica cultiva...
415.0 [0..1] [560..1]

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Predicted Domain #1
Region A:
Residues: [1-379]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCFSSAAK SSGHNRSSRN PHPHPPLTVV KSRPPRSPCS FMAVTIQKDH RTQPRRNATA  60
   61 KKTPTRHTPP HGKVREKVIS NNGRRHGETI PYGKRVDFGY AKDFDHRYTI GKLLGHGQFG 120
  121 YTYVATDKKT GDRVAVKKID KAKMTIPIAV EDVKREVKIL QALTGHENVV RFYNAFEDKN 180
  181 SVYIVMELCE GGELLDRILA RKDSRYSERD AAVVVRQMLK VAAECHLRGL VHRDMKPENF 240
  241 LFKSTEEDSP LKATDFGLSD FIKPGKKFHD IVGSAYYVAP EVLKRRSGPE SDVWSIGVIS 300
  301 YILLCGRRPF WDKTEDGIFK EVLKNKPDFR RKPWPTISNS AKDFVKKLLV KDPRARLTAA 360
  361 QALSHPWVRE GGDASEIPI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.154902
Match: 2bdwA
Description: Crystal Structure of the Auto-Inhibited Kinase Domain of Calcium/Calmodulin Activated Kinase II
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [380-571]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DISVLNNMRQ FVKFSRLKQF ALRALATTLD EEELADLRDQ FDAIDVDKNG VISLEEMRQA  60
   61 LAKDHPWKLK DARVAEILQA IDSNTDGFVD FGEFVAAALH VNQLEEHDSE KWQQRSRAAF 120
  121 EKFDIDGDGF ITAEELRMHT GLKGSIEPLL EEADIDNDGK ISLQEFRRLL RTASIKSRNV 180
  181 RSPPGYLISR KV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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