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View Structure Prediction Details

Protein: CSLCC_ARATH
Organism: Arabidopsis thaliana
Length: 699 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSLCC_ARATH.

Description E-value Query
Range
Subject
Range
CSLC5_ARATH - Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana GN=CSLC5 PE=1 SV=1
439.0 [0..1] [698..1]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPKFEWWAK GNNNNTRKGT PVVVKMENPN NWSMVELESP SHDDFLVRTH EKSRNKNARQ  60
   61 LTWVLLLKAH RAAGCLTSLG SALFALGTAV RRRIAAGRTD IEISSSGVGS LQKQNHTKKS 120
  121 KLFYSCLKVF LWLSLILLGF EIAAYFKGWS FGTSKLQLQF IFNKGFFDWV YTRWVLLRVE 180
  181 YLAPPLQFLA NGCIV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [196-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFLVQSLDRL ILCLGCFWIR FKKIKPVPKP DSISDLESGD NGAFLPMVLV QIPMCNEKEV  60
   61 YQQSIAAVCN LDWPKGKILI QILDDSDDPI TQSLIKEEVH KWQKLGARIV YRHRVNREGY 120
  121 KAGNLKSAMN CSYVKDYEFV AIFDADFQPL PDFLKKTIPH FKDNEEIGLV QARWSFVNKE 180
  181 ENLLTRLQNI NLAFHFEVEQ QVNSVFLNFF GFNGTAGVWR IKALEDSGGW LERTTVEDMD 240
  241 IAVRAHLHGW KFVFLNDVEC QCELPESYEA YRKQQHRWHS GPMQLFRLCL PAVIKSKISI 300
  301 GKKFNLIFLF FLLRKLILPF YSFTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.0
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #3
Region A:
Residues: [521-699]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FCIILPMTMF VPEAELPAWV VCYIPATMSF LNILPAPKSF PFIVPYLLFE NTMSVTKFNA  60
   61 MVSGLFQLGS AYEWVVTKKS GRSSEGDLAA LVEKDEKTTK HQRGVSAPET EAEKKAEKTK 120
  121 RKKKKHNRIY MKELSLAFLL LTAATRSLLS AQGIHFYFLL FQGISFLLVG LDLIGEQVE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle