| Protein: | RMV1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 490 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RMV1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
289.0 | [0..40] | [411..964] |
|
Region A: Residues: [1-417] |
1 11 21 31 41 51
| | | | | |
1 MTELSSPNLD SASQKPRIST ENPPPPPPHI SIGVTTGDPA TSPARTVNQI KKITVLPLVF 60
61 LIFYEVSGGP FGIEDSVKAA GPLLAIVGFI VFPFIWSIPE ALITAEMGTM FPENGGYVVW 120
121 VTLAMGPYWG FQQGWVKWLS GVIDNALYPI LFLDYLKSGI PILGSGIPRV AAILVLTVAL 180
181 TYLNYRGLSI VGVAAVLLGV FSILPFVVMS FMSIPKLKPS RWLVVSKKMK GVNWSLYLNT 240
241 LFWNLNYWDS VSTLTGEVEN PSKTLPRALF YALLLVVFSY IFPVLTGTGA IALDQKLWTD 300
301 GYFADIGKVI GGVWLGWWIQ AAAATSNMGM FLAEMSSDSF QLLGMAERGM LPEVFAKRSR 360
361 YRTPWVGILF SASGVIILSW LSFQEIVAAE NLLYCFGMVL EFITFVRLRM KYPAASR
|
| Detection Method: |  |
| Confidence: | 1.29 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [418-490] |
1 11 21 31 41 51
| | | | | |
1 PFKIPVGVLG SVLMCIPPTV LIGVIMAFTN LKVALVSLAA IVIGLVLQPC LKQVEKKGWL 60
61 KFSTSSHLPN LME
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
