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View Structure Prediction Details

Protein: MCA3_ARATH
Organism: Arabidopsis thaliana
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCA3_ARATH.

Description E-value Query
Range
Subject
Range
gi|37788549 - gi|37788549|gb|AAP44516.1| metacaspase 3 [Arabidopsis thaliana]
359.0 [0..1] [362..1]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRREVRCR CGRRMWVQPD ARTVQCSTCH TVTQLYSLVD IARGANRIIH GFQQLLRQHQ  60
   61 PQHHEQQQQQ MMAQPPPRLL EPLPSPF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.154902
Match: 1ibcA
Description: Interleukin-1beta converting enzyme (a cysteine protease)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [88-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKKRAVLCGV NYKGKSYSLK GCISDAKSMR SLLVQQMGFP IDSILMLTED EASPQRIPTK  60
   61 RNIRKAMRWL VEGNRARDSL VFHFSGHGSQ QNDYNGDEID GQDEALCPLD HETEGKIIDD 120
  121 EINRILVRPL VHGAKLHAVI DACNSGTVLD LPFICRMERN GSYEWEDHRS VRAYKGTDGG 180
  181 AAFCFSACDD DESSGYTPVF TGKNTGAMTY SFIKAVKTAG PAPTYGHLLN LMCSAIREAQ 240
  241 SRLAFNGDYT SSDASAEPLL TSSEEFDVYA TKFVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.09691
Match: 2j31A
Description: No description for 2j31A was found.

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