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View Structure Prediction Details

Protein: gi|15222191, gi|...
Organism: Arabidopsis thaliana
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222191, gi|....

Description E-value Query
Range
Subject
Range
gi|51243897, gi|... - gi|51243897|ref|YP_063781.1| dTDP-D-glucose-4,6-dehydratase [Desulfotalea psychrophila LSv54], gi|50...
188.0 [0..1] [319..13]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTEKSKILV IGGTGYMGEF IVEGSAKAGN PTFALVREAS LSDPVKSKTI QSFKDLGVTI  60
   61 LHGDLNDHES LVKAIKQVDV VISTIGHKQI FDQTKIISAI KEAGNVKRFL PAEFGIDVER 120
  121 TSAVEPAKSL FAGKVQIRRA IEAEGIPYTY VVSNCSAGFY LRTLLQFESG LISHTRDKAI 180
  181 IFGDKNVPPR DKVTILGDGN AKVVINKEED VAAYMIKAVD DLRTLNKTLY ISPPNNILSM 240
  241 NEMVTLWEKK IGKSLEKTHI SEEQILKSIQ VPIDVFKSIN HAVFVKGDQT SFTIEPWFGE 300
  301 EASVLYPDVK YTSIDEYLSQ FT

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Detection Method: PSI-BLAST
Confidence: 41.522879
Match: 1qycA
Description: Crystal structures of pinoresinol-lariciresinol and phenylcoumaran benzylic ether reductases, and their relationship to isoflavone reductases
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.26736023026862 bayes_pls_golite062009
oxidoreductase activity 0.68812524232244 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle