| Protein: | AGL81_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 355 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL81_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
247.0 | [0..8] | [264..1] |
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245.0 | [0..8] | [264..1] |
|
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244.0 | [0..8] | [264..1] |
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243.0 | [0..8] | [264..1] |
|
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242.0 | [0..8] | [262..1] |
|
|
242.0 | [0..8] | [264..1] |
|
|
242.0 | [0..8] | [264..1] |
|
|
241.0 | [0..8] | [264..1] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MAIRSLPSSS RCSSSSSSSS YSLASTSLSN RLETIFKKAS ELCTLCDIEA CVIYYGPDGE 60
61 LKTWPPEREK VEDIALRYSQ LNEALRRKKS VTLYDFLNKK
|
| Detection Method: |  |
| Confidence: | 23.154902 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [101-233] |
1 11 21 31 41 51
| | | | | |
1 KDKTNLEKKA KITDNDDLKT CLKNVNILKY PLADHYSPDQ VSQLIQSLEP HVSKVRERIR 60
61 FVESQKHKET KPDHQSLASS SLNHQTQSLN PSQFSLFMYN HGDNTLSQIP VSASNFNQDY 120
121 FSALLEQSEL KSQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.713 | N/A | N/A | a.216.1 | Description not found. |
| View | Download | 0.660 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.627 | N/A | N/A | a.29.13 | Description not found. |
| View | Download | 0.624 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.597 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.590 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.555 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.511 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.465 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.464 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.284 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.231 | N/A | N/A | a.123.1 | Nuclear receptor ligand-binding domain |
| View | Download | 0.217 | N/A | N/A | a.7.8 | GAT domain |
|
Region A: Residues: [234-355] |
1 11 21 31 41 51
| | | | | |
1 IMKQDLCGYE QNMCMSNHGD ATLSQIPLSA SNLNQDFSAL LQDESGLMQQ ELCGYDQNMF 60
61 MNNNNFQHSF VSNTQDHSAP VVQESVNNNY GLMPHVPCGY DQNLFTSDIT NNNLLINNSM 120
121 FL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.279 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.279 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.270 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.270 | N/A | N/A | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.246 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.230 | N/A | N/A | c.55.6 | DNA repair protein MutS, domain II |
| View | Download | 0.227 | N/A | N/A | b.80.8 | Description not found. |
