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View Structure Prediction Details

Protein: INVA_ARATH
Organism: Arabidopsis thaliana
Length: 616 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INVA_ARATH.

Description E-value Query
Range
Subject
Range
CINV2_ARATH - Alkaline/neutral invertase CINV2 OS=Arabidopsis thaliana GN=CINV2 PE=1 SV=1
580.0 [0..57] [604..16]

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Predicted Domain #1
Region A:
Residues: [1-127]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAIYLLRKI STKTPSRFHR SLFFSTFSKD SPPDLSRTTS IRHLSSSQRF VSSSIYCFPQ  60
   61 SKILPNRFSE KTTGISVRQF STSVETNLSD KSFERIHVQS DAILERIHKN EEEVETVSIG 120
  121 SEKVVRE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [128-616]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESEAEKEAWR ILENAVVRYC GSPVGTVAAN DPGDKMPLNY DQVFIRDFVP SALAFLLKGE  60
   61 GDIVRNFLLH TLQLQSWEKT VDCYSPGQGL MPASFKVRTV ALDENTTEEV LDPDFGESAI 120
  121 GRVAPVDSGL WWIILLRAYG KITGDFSLQE RIDVQTGIKL IMNLCLADGF DMFPTLLVTD 180
  181 GSCMIDRRMG IHGHPLEIQS LFYSALRCSR EMLSVNDSSK DLVRAINNRL SALSFHIREY 240
  241 YWVDIKKINE IYRYKTEEYS TDATNKFNIY PEQIPPWLMD WIPEQGGYLL GNLQPAHMDF 300
  301 RFFTLGNFWS IVSSLATPKQ NEAILNLIEA KWDDIIGNMP LKICYPALEY DDWRIITGSD 360
  361 PKNTPWSYHN SGSWPTLLWQ FTLACMKMGR PELAEKALAV AEKRLLADRW PEYYDTRSGK 420
  421 FIGKQSRLYQ TWTVAGFLTS KLLLANPEMA SLLFWEEDYE LLDICACGLR KSDRKKCSRV 480
  481 AAKTQILVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.69897
Match: 2ds3A
Description: No description for 2ds3A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle