| Protein: | gi|20197675, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20197675, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
366.0 | [0..1] | [505..1] |
|
|
276.0 | [0..72] | [484..641] |
|
|
261.0 | [0..147] | [505..184] |
|
|
261.0 | [0..147] | [505..184] |
|
|
253.0 | [0..145] | [455..143] |
|
|
251.0 | [0..145] | [455..143] |
|
|
251.0 | [0..149] | [455..143] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MTRILVQRGS SGSSSNSSRP SSSSSSSSGS ETQINNNIPV PPVTIDEEIT DEKQEEVTVV 60
61 EKAECSDAKD VAVDSDEPAD REDDEGLVVA ENVHVQSEGI DCDSPVSGGS NSDSPPVPAP 120
121 PPKPSSTVNP GSNRSVLGSF GALRIGPTRR AAGPRSLVSS RSSPTGSHPS SP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [173-417] |
1 11 21 31 41 51
| | | | | |
1 RSHSENEGYN SSDEHMPCYV PSHPGSGLER EHQFEAEIRY SKGFEIRRML EDGNCLFRAV 60
61 ADQVYGDSEA YDLARQMCMD YMEQERDHFS QFITEGFTSY LKRKRRDKVY GNNVEIQALA 120
121 EMYNRPIHIY SYSTEPINIF QGNYSTDTPP IRLSYHHGNH YNSLVDPHRL TVGAGLGFSS 180
181 LSGRHVDKEQ VKAAIKAQQE HQIDNALLAE GRFYSDLELT EKEIERSVME ASRAEYLMEW 240
241 SKPRI
|
| Detection Method: | |
| Confidence: | 2.61 |
| Match: | 1tffA |
| Description: | Structure of Otubain-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [418-505] |
1 11 21 31 41 51
| | | | | |
1 GPKESSTSNA ETSSSGARPS GSDSKPAEAV KEKTVLSSSI EMVLSMGFSY AQAMEAYSIF 60
61 GDDVDSMVCY VLETSCGGNN RRKGKATE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.793 | a.240.1 | Description not found. |
| View | Download | 0.660 | a.28.1 | ACP-like |
| View | Download | 0.507 | a.240.1 | Description not found. |
| View | Download | 0.477 | a.240.1 | Description not found. |
| View | Download | 0.440 | a.240.1 | Description not found. |
| View | Download | 0.432 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.407 | a.39.1 | EF-hand |
| View | Download | 0.406 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.405 | a.28.1 | ACP-like |
| View | Download | 0.375 | a.240.1 | Description not found. |
