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View Structure Prediction Details

Protein: HS235_ARATH
Organism: Arabidopsis thaliana
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HS235_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554988 - gi|21554988|gb|AAM63747.1| mitochondrial heat shock 22 kd protein-like [Arabidopsis thaliana]
192.0 [0..1] [210..1]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS  60
   61 RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR GMGASGVRRG WNVKEKDDAL 120
  121 HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI 180
  181 KAEMKNGVLK VVIPKIKEDE RNNIRHINVD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.045757
Match: 1gmeA
Description: Small heat shock protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle