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View Structure Prediction Details

Protein: CESA1_ARATH
Organism: Arabidopsis thaliana
Length: 1081 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CESA1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASAGLVAG SYRRNELVRI RHESDGGTKP LKNMNGQICQ ICGDDVGLAE TGDVFVACNE  60
   61 CAFPVCRPCY EYERKDGTQC CPQCKTRFRR HRGSPRVEGD EDEDDVDDIE NE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.522879
Match: 1weoA
Description: Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [113-239]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FNYAQGANKA RHQRHGEEFS SSSRHESQPI PLLTHGHTVS GEIRTPDTQS VRTTSGPLGP  60
   61 SDRNAISSPY IDPRQPVPVR IVDPSKDLNS YGLGNVDWKE RVEGWKLKQE KNMLQMTGKY 120
  121 HEGKGGE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [240-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEGTGSNGEE LQMADDTRLP MSRVVPIPSS RLTPYRVVII LRLIILCFFL QYRTTHPVKN  60
   61 AYPLWLTSVI CEIWFAFSWL LDQFPKWYPI NRETYLDRLA IRYDRDGEPS QLVPVDVFVS 120
  121 TVDPLKEPPL VTANTVLSIL SVDYPVDKVA CYVSDDGSAM LTFESLSETA EFAKKWVPFC 180
  181 KKFNIEPRAP EFYFAQKIDY LKD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [443-508]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KIQPSFVKER RAMKREYEEF KVRINALVAK AQKIPEEGWT MQDGTPWPGN NTRDHPGMIQ  60
   61 VFLGHS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [509-652]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGLDTDGNEL PRLIYVSREK RPGFQHHKKA GAMNALIRVS AVLTNGAYLL NVDCDHYFNN  60
   61 SKAIKEAMCF MMDPAIGKKC CYVQFPQRFD GIDLHDRYAN RNIVFFDINM KGLDGIQGPV 120
  121 YVGTGCCFNR QALYGYDPVL TEED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [653-823]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LEPNIIVKSC CGSRKKGKSS KKYNYEKRRG INRSDSNAPL FNMEDIDEGF EGYDDERSIL  60
   61 MSQRSVEKRF GQSPVFIAAT FMEQGGIPPT TNPATLLKEA IHVISCGYED KTEWGKEIGW 120
  121 IYGSVTEDIL TGFKMHARGW ISIYCNPPRP AFKGSAPINL SDRLNQVLRW A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [824-1081]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGSIEILLSR HCPIWYGYHG RLRLLERIAY INTIVYPITS IPLIAYCILP AFCLITDRFI  60
   61 IPEISNYASI WFILLFISIA VTGILELRWS GVSIEDWWRN EQFWVIGGTS AHLFAVFQGL 120
  121 LKVLAGIDTN FTVTSKATDE DGDFAELYIF KWTALLIPPT TVLLVNLIGI VAGVSYAVNS 180
  181 GYQSWGPLFG KLFFALWVIA HLYPFLKGLL GRQNRTPTIV IVWSVLLASI FSLLWVRINP 240
  241 FVDANPNANN FNGKGGVF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 1ehkA
Description: Bacterial ba3 type cytochrome c oxidase subunit I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle