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View Structure Prediction Details

Protein: CSLC5_ARATH
Organism: Arabidopsis thaliana
Length: 692 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSLC5_ARATH.

Description E-value Query
Range
Subject
Range
CSLC8_ARATH - Probable xyloglucan glycosyltransferase 8 OS=Arabidopsis thaliana GN=CSLC8 PE=2 SV=1
490.0 [0..1] [692..1]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPRLDFSDW WAKDTRKGTP VVVKMENPNY SVVEIDGPDS AFRPVEKSRG KNAKQVTWVL  60
   61 LLKAHRAVGC LTWLATVFWS LLGAIKKRLS FTHPLGSEKL GRDRWLFTAI KLFLAVSLVI 120
  121 LGFEIVAYFR GWH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [134-506]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YFQSPSLHIP TSTLEIQSLF HLVYVGWLTL RADYIAPPIK ALSKFCIVLF LIQSVDRLVL  60
   61 CLGCFWIKYK KIKPRFDEEP FRNDDAEGSG SEYPMVLVQI PMCNEREVYE QSISAVCQLD 120
  121 WPKDRILVQV LDDSNDESIQ QLIKAEVAKW SQKGVNIIYR HRLVRTGYKA GNLKSAMSCD 180
  181 YVEAYEYVAI FDADFQPTPD FLKLTVPHFK DNPELGLVQA RWTFVNKDEN LLTRLQNINL 240
  241 CFHFEVEQQV NGVFLNFFGF NGTAGVWRIK ALEESGGWLE RTTVEDMDIA VRAHLHGWKF 300
  301 IYLNDVKVLC EVPESYEAYK KQQHRWHSGP MQLFRLCLGS ILTSKIAIWK KANLILLFFL 360
  361 LRKLILPFYS FTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.045757
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #3
Region A:
Residues: [507-692]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FCIILPLTMF VPEAELPVWV ICYIPVFMSF LNLLPSPKSF PFIVPYLLFE NTMSVTKFNA  60
   61 MVSGLFQLGS SYEWIVTKKA GRSSESDLLS ITEKETPTKK SQLLRGVSDS ELLELSQLEE 120
  121 QKQAVSKKPV KKTNKIYHKE LALAFLLLTA ALRSLLAAQG VHFYFLLFQG VTFLLVGLDL 180
  181 IGEQMS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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