| Protein: | CDC5L_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 844 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC5L_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
341.0 | [0..64] | [842..1931] |
|
|
302.0 | [0..64] | [842..931] |
|
|
300.0 | [0..64] | [843..1032] |
|
|
300.0 | [0..64] | [842..933] |
|
|
300.0 | [0..59] | [842..943] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60
61 EWTREEDEKL LHLAKLLPTQ WRTIAPIVGR TPSQC
|
| Detection Method: |  |
| Confidence: | 11.69897 |
| Match: | 2dimA |
| Description: | No description for 2dimA was found. |
|
Region A: Residues: [96-220] |
1 11 21 31 41 51
| | | | | |
1 LERYEKLLDA ACTKDENYDA ADDPRKLRPG EIDPNPEAKP ARPDPVDMDE DEKEMLSEAR 60
61 ARLANTRGKK AKRKAREKQL EEARRLASLQ KRRELKAAGI DGRHRKRKRK GIDYNAEIPF 120
121 EKRAP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [221-375] |
1 11 21 31 41 51
| | | | | |
1 AGFYDTADED RPADQVKFPT TIEELEGKRR ADVEAHLRKQ DVARNKIAQR QDAPAAILQA 60
61 NKLNDPEVVR KRSKLMLPPP QISDHELEEI AKMGYASDLL AENEELTEGS AATRALLANY 120
121 SQTPRQGMTP MRTPQRTPAG KGDAIMMEAE NLARL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [376-458] |
1 11 21 31 41 51
| | | | | |
1 RDSQTPLLGG ENPELHPSDF TGVTPRKKEI QTPNPMLTPS MTPGGAGLTP RIGLTPSRDG 60
61 SSFSMTPKGT PFRDELHINE DMD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [459-542] |
1 11 21 31 41 51
| | | | | |
1 MHESAKLERQ RREEARRSLR SGLTGLPQPK NEYQIVAQPP PEESEEPEEK IEEDMSDRIA 60
61 REKAEEEARQ QALLKKRSKV LQRD
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 2iw5A |
| Description: | No description for 2iw5A was found. |
|
Region A: Residues: [543-844] |
1 11 21 31 41 51
| | | | | |
1 LPRPPAASLA VIRNSLLSAD GDKSSVVPPT PIEVADKMVR EELLQLLEHD NAKYPLDDKA 60
61 EKKKGAKNRT NRSASQVLAI DDFDENELQE ADKMIKEEGK FLCVSMGHEN KTLDDFVEAH 120
121 NTCVNDLMYF PTRSAYELSS VAGNADKVAA FQEEMENVRK KMEEDEKKAE HMKAKYKTYT 180
181 KGHERRAETV WTQIEATLKQ AEIGGTEVEC FKALKRQEEM AASFRKKNLQ EEVIKQKETE 240
241 SKLQTRYGNM LAMVEKAEEI MVGFRAQALK KQEDVEDSHK LKEAKLATGE EEDIAIAMEA 300
301 SA
|
| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
