| Protein: | VAP12_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 239 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAP12_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
241.0 | [0..1] | [239..1] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MSNELLTIDP VDLQFPFELK KQISCSLYLG NKTDNYVAFK VKTTNPKKYC VRPNTGVVHP 60
61 RSSSEVLVTM QAQKEAPADL QCKDKFLLQC VVASPGATPK DVTHEMFSKE AGHRVEETKL 120
121 RVVYVAPPRP PSPVREGSEE GSSPRASVSD NGNASDFTAA PRFSADRVDA Q
|
| Detection Method: |  |
| Confidence: | 33.0 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [172-239] |
1 11 21 31 41 51
| | | | | |
1 DNSSEARALV TKLTEEKNSA VQLNNRLQQE LDQLRRESKR SKSGGIPFMY VLLVGLIGLI 60
61 LGYIMKRT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
