| Protein: | RER4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 386 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RER4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
535.0 | [0..1] | [386..1] |
|
|
416.0 | [0..101] | [383..96] |
|
|
389.0 | [0..103] | [383..119] |
|
|
388.0 | [0..101] | [383..427] |
|
Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MAIASCFFCV PTPNTAISES NLTWPHIASF PRLSSSSSFN GVISAKSISF NRRVPITPVL 60
61 SASSGNGGSD NNGGGLSGGG GGGDGGKNDG DGHGDEDRD
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.525 | a.4.1 | Homeodomain-like |
| View | Download | 0.292 | a.77.1 | DEATH domain |
| View | Download | 0.203 | d.58.14 | Ribosomal protein S6 |
| View | Download | 0.203 | d.58.14 | Ribosomal protein S6 |
|
Region A: Residues: [100-164] |
1 11 21 31 41 51
| | | | | |
1 RNRNEAMLLL KESGIELESL PKDLAAAIEA GRIPGSVITR FLELQKSAVM RWLMQFGGFR 60
61 ERLLA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.790 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.790 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.763 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.763 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.754 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.627 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.622 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.622 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.612 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.353 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.334 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.322 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.301 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.261 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [165-386] |
1 11 21 31 41 51
| | | | | |
1 DDLFMAKLAM ECGVGIFTKT AAEYERRREN FFNELEVVFA DVAMAIIADF MLVYLPAPTV 60
61 SLRPPLALTA GGISKFFHNC PDNAFQVALS GTSYTLLQRL GAITRNGAKL FAVGTTSSLV 120
121 GTAITNAFIK ARKAVDQNSE GEVETVPIVS TSVAYGVYMA VSSNLRYQIV AGVIEQRLLE 180
181 PMLHQHKLAL SALCFAVRTG NTFLGSLLWV DYARLIGIQK SH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
