| Protein: | PAPS2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 800 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAPS2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
886.0 | [0..1] | [781..1] |
|
Region A: Residues: [1-508] |
1 11 21 31 41 51
| | | | | |
1 MVSTQQRTDD DSSQPVKASL KSYGITEPLS IAGPSAADVK RNLELEKFLV DEGLYESKEE 60
61 TMRREEVVVR IDQIVKHWVK QLTRQRGYTD QMVEDANAVI FTFGSYRLGV HGPMADIDTL 120
121 CVGPSYVNRE EDFFIFFRDI LAEMEEVTEL QPVTDAHVPV MKFKFQGISI DLLYASISLL 180
181 VIPQDLDISN SSVLCDVDEQ TVRSLNGCRV ADQILKLVPN SEHFRTTLRC LKYWAKKRGV 240
241 YSNVTGFLGG VNWALLVARL CQFYPNAIPS MLVSRFFRVY TQWRWPNPVM LCAIEEDDLS 300
301 FPVWDPRKNH RDRYHLMPII TPAYPCMNSS YNVSQSTLRV MTEQFQFGNT ICQEIELNKQ 360
361 HWSSLFQQYM FFEAYKNYLQ VDVLAADAED LLAWKGWVES RFRQLTLKIE RDTNGMLMCH 420
421 PQPNEYVDTS KQFRHCAFFM GLQRADGFGG QECQQFDIRG TVDEFRQEVN MYMFWRPGMD 480
481 VHVSHVRRRQ LPSFVFPNGY KRSRQSRH
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1f5aA |
| Description: | Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.122769147009 | bayes_pls_golite062009 |
| RNA binding | 1.07207584601969 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.92178707322923 | bayes_pls_golite062009 |
| polynucleotide adenylyltransferase activity | 0.911825870004661 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.667889614569279 | bayes_pls_golite062009 |
| transferase activity | 0.63270331673446 | bayes_pls_golite062009 |
|
Region A: Residues: [509-800] |
1 11 21 31 41 51
| | | | | |
1 QSQQCREPGD EGVGSLSDSV ERYAKRKNDD EIMNSRPEKR EKRASCSLHT LDAASPDSSG 60
61 ITTSGTPQIG IVPGPRAECL VTGDLVCNVT SLPNVEVEAE KFISKITELR KFSQYEHTSG 120
121 SEQILEVDSR ALVQSYHDLA EPVAKHVRPD LSALLACEGG QNKEIGHDMG SESINDTDTQ 180
181 HLPRRLNVNE DVDEVEREAK LGEIAGGVLW NGHCGRNLDH EGFVTPANLD SAVENRNLHS 240
241 DGLFKSGLPE ELQSNSLLSG TGKLDDGARS ESLQNEMMRH VFLQPIIGLC KS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
