YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DGAT1_ARATH
Organism: Arabidopsis thaliana
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DGAT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|7576941 - gi|7576941|gb|AAF64065.1|AF251794_1 putative diacylglycerol acyltransferase [Brassica napus]
669.0 [0..1] [520..1]

Back

Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILDSAGVT TVTENGGGEF VDLDRLRRRK SRSDSSNGLL LSGSDNNSPS DDVGAPADVR  60
   61 DRIDSVVNDD AQGTANLAGD NNGGGDNNGG GRGGGEGRGN ADATFTYRPS VPAHRRARES 120
  121 PLSSDAIFKQ SHAGLFNLCV VVLIAVNSRL IIENLMKYGW LIR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.976
Match: 2ao7A
Description: No description for 2ao7A was found.

Predicted Domain #2
Region A:
Residues: [164-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TDFWFSSRSL RDWPLFMCCI SLSIFPLAAF TVEKLVLQKY ISEPVVIFLH IIITMTEVLY  60
   61 PVYVTLRCDS AFLSGVTLML LTCIVWLKLV S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [255-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YAHTSYDIRS LANAADKANP EVSYYVSLKS LAYFMVAPTL CYQPSYPR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [303-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SACIRKGWVA RQFAKLVIFT GFMGFIIEQY INPIVRNSKH PLKGDLLYAI ERVLKLSVPN  60
   61 LYVWLCMFYC FFHLWLNILA ELLCFGDREF YKDWWNAKSV GDYWRMWNMP VHKWMVRHIY 120
  121 FPCLRSKIPK TLAIIIAFLV SAVFHELCIA VPCRLFKLWA FLGIMFQVPL VFITNYLQER 180
  181 FGSTVGNMIF WFIFCIFGQP MCVLLYYHDL MNRKGSMS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle