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View Structure Prediction Details

Protein: gi|7442218, gi|3...
Organism: Arabidopsis thaliana
Length: 104 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7442218, gi|3....

Description E-value Query
Range
Subject
Range
gi|7488613, gi|2... - pir||T17020 auxin-induced protein - apple tree, gi|2924327|emb|CAB07785.1| hypothetical protein [Mal...
139.0 [0..1] [102..1]
gi|3096945, gi|7... - pir||T05296 probable auxin-induced protein T4L20.340 - Arabidopsis thaliana, gi|7270427|emb|CAB80193...
135.0 [0..1] [102..1]
ARG7_VIGRR - Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1
gi|7442222, gi|2... - pir||T10942 auxin-induced protein 6B - mung bean, gi|287570|dbj|BAA03310.1| ORF [Vigna radiata]
131.0 [0..1] [102..1]
gi|217071626, gi... - gi|92888355|gb|ABE89373.1| Auxin responsive protein [Medicago truncatula], gi|92872467|gb|ABE81082.1...
128.0 [0..1] [102..1]
AX10A_SOYBN - Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
128.0 [0..1] [102..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIQLIGLSQ AKQKLQRSLS ARIASLLATS GTNNVPKGHV AVYVGETYHR KRFVIPISYL  60
   61 NHPLFQGLLN LAEEEFGFDH PMGGLTIPCT EDYFTALASI LSGS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.657577
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.662 N/A N/A d.109.1 Actin depolymerizing proteins
View Download 0.576 N/A N/A d.58.42 N-utilization substance G protein NusG, N-terminal domain
View Download 0.576 N/A N/A d.58.42 N-utilization substance G protein NusG, N-terminal domain
View Download 0.563 N/A N/A d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.544 N/A N/A d.218.1 Nucleotidyltransferase
View Download 0.517 N/A N/A d.58.7 RNA-binding domain, RBD
View Download 0.478 N/A N/A d.58.49 YajQ-like
View Download 0.467 N/A N/A a.74.1 Cyclin-like
View Download 0.456 N/A N/A d.58.7 RNA-binding domain, RBD
View Download 0.440 N/A N/A d.31.1 Cdc48 domain 2-like
View Download 0.416 N/A N/A d.34.1 DNA-binding domain of Mlu1-box binding protein MBP1
View Download 0.352 N/A N/A d.110.4 SNARE-like
View Download 0.286 N/A N/A c.47.1 Thioredoxin-like
View Download 0.257 N/A N/A d.58.4 Dimeric alpha+beta barrel
View Download 0.253 N/A N/A d.58.4 Dimeric alpha+beta barrel


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle