| Protein: | SYT1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 541 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYT1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
419.0 | [0..1] | [540..1] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MGFFSTILGF CGFGVGISLG LVIGYVLFVY LLPNDVKDPE IRSIADQDPK AMLRMLPEIP 60
61 LWVKNPDFDR VDWINRFLEY MWPYLDKAIC KTAKNIAKPI IEEQIPKYKI DSVEFETLTL 120
121 GSLPPTFQGM KVYLTDEKEL IMEPCLKWAA NPNILVAIKA FGLKA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [166-247] |
1 11 21 31 41 51
| | | | | |
1 TVQVVDLQVF AQPRITLKPL VPSFPCFANI YVSLMEKPHV DFGLKLGGAD LMSIPGLYRF 60
61 VQEQIKDQVA NMYLWPKTLV VP
|
| Detection Method: | |
| Confidence: | 40.0 |
| Match: | 1djgA |
| Description: | Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [248-541] |
1 11 21 31 41 51
| | | | | |
1 ILDPAKAFRR PVGIVHVKVV RAVGLRKKDL MGGADPFVKI KLSEDKIPSK KTTVKHKNLN 60
61 PEWNEEFKFS VRDPQTQVLE FSVYDWEQVG NPEKMGMNVL ALKEMVPDEH KAFTLELRKT 120
121 LDGGEDGQPP DKYRGKLEVE LLYKPFTEEE MPKGFEETQA VQKAPEGTPA AGGMLVVIVH 180
181 SAEDVEGKHH TNPYVRIYFK GEERKTKHVK KNRDPRWNEE FTFMLEEPPV REKLHVEVLS 240
241 TSSRIGLLHP KETLGYVDIP VVDVVNNKRM NQKFHLIDSK NGKIQIELEW RTAS
|
| Detection Method: | |
| Confidence: | 46.69897 |
| Match: | 1dqvA |
| Description: | Synaptogamin I |
Matching Structure (courtesy of the PDB): |
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