YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DNAT1_ARATH
Organism: Arabidopsis thaliana
Length: 156 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNAT1_ARATH.

Description E-value Query
Range
Subject
Range
gi|52424791, gi|... - gi|52424791|ref|YP_087928.1| hypothetical protein MS0736 [Mannheimia succiniciproducens MBEL55E], gi...
136.0 [0..22] [149..7]

Back

Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSASSNTKA IDPPLHMLGF EFDELSPTRI TGRLPVSPVC CQPFKVLHGG VSALIAESLA  60
   61 SMGAHMASGF KRVAGIQLSI NHLKSADLGD LVFAEATPVS TGKTIQVWEV KLWKTTQKDK 120
  121 ANKILISSSR VTLICNLPIP DNAKDAANML KMVAKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.154902
Match: 1yliA
Description: Structure of HI0827, a thioesterase acting on short-chain acyl-CoA compounds
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.74605540351792 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle